Intel core based mini-itx mainboards now exist in reasonable profusion so there is a big step-up for applications needing something more powerful than a via c7 cpu... On the other end, 500mhz AMD geod processor based mini-itx boards are also hitting the market for still lower powered devices.
The original 2001 mini-itx motherboards are literally still in the marketplace so there's a certain amount of endurance that the embedded systems have that simply doesn't exist in the consumer space.
Small things that caught my eye recently:
MSI fuzzy 945GM2 - Intel mainboard, 3 ethernets + pci express. Quite powerful
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soekris net 5501 - Finally shipped! AMD geod based 4 ethernets + mini-pci and regular pci...
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routerboard-100 Looks like a cheap way to experiment with embedded mips on something a little more powerful and flexible than a buffalo accesspoint.
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